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sci-biology/
pysam

Python interface for the SAM/BAM sequence alignment and mapping format

https://github.com/pysam-developers/pysam

Pkgcheck Warnings

  • All Versions
    • UnstableOnly
      for arches: [ amd64, x86 ], all versions are unstable: [ 0.22.1 ]
  • 9999
    • DeprecatedEclassVariable
      uses deprecated variable on line 38: DISTUTILS_IN_SOURCE_BUILD (migrate to (none))
    • DistutilsNonPEP517Build
      uses deprecated non-PEP517 build mode, please switch to DISTUTILS_USE_PEP517=...
    • PythonCompatUpdate
      PYTHON_COMPAT updates available: python3_12, python3_13
  • 0.22.1
    • DeprecatedEclassVariable
      uses deprecated variable on line 32: DISTUTILS_IN_SOURCE_BUILD (migrate to (none))
    • DistutilsNonPEP517Build
      uses deprecated non-PEP517 build mode, please switch to DISTUTILS_USE_PEP517=...
    • PythonCompatUpdate
      PYTHON_COMPAT update available: python3_13

Pkgcheck is used regularly to generate QA reports. Pkgcheck is a pkgcore-based QA utility for ebuild repos.